PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe5G413500.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 463aa    MW: 51132.8 Da    PI: 8.0891
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe5G413500.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH47.33.6e-15286331555
                        HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                        hn+ Er+RRd+iN+++ +L++l+P++      K +Ka++L +++eY+k Lq
  Aqcoe5G413500.3.p 286 HNQSERKRRDKINQRMKTLQKLVPNS-----SKTDKASMLDEVIEYLKTLQ 331
                        9************************8.....7******************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.7E-18279342IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088817.574281330IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.09E-15286335No hitNo description
PfamPF000108.7E-13286331IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.106.0E-18286339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.0E-17287336IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009567Biological Processdouble fertilization forming a zygote and endosperm
GO:0009506Cellular Componentplasmodesma
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 463 aa     Download sequence    Send to blast
MSQCVPNWDL DENSTSIRVP FHPNSNMNDA KASDVTDPTL DYEVAELTWE NGQLGLHGLG  60
PPRVIGGKPI SSKYTWEKPR ASGTLESIVN QAVQLGPCEA PIRRDEFVPW FDHQRAIGAA  120
GNMTMDALVP SSNSIHFVHN SAKRIADPNQ GVGTCVTRKS TRVESCGGTT SFERGKEREE  180
RIARKRARVQ NRVGMAREGC SRNQSVSVSE TFGRESRQVG ADSCEMDLDT GFTSTSLDSD  240
TNLNTIDDRD SVSHTRPQAR TEEDNKSTQN DKSTISTKRS RAAAIHNQSE RKRRDKINQR  300
MKTLQKLVPN SSKTDKASML DEVIEYLKTL QAQVHMMSRM SMPQMMMPMT MQQQLQMTMM  360
AQMGMAGMGM GMGMGGMMDH MNSIGRPNIP GMPHQVLNPA AFMSMAPWDG TNDRVPGSSA  420
LMPDPMASFL AACQTQPMTM DAYSRMGALY QQIHQQVPNS KS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1289294ERKRRD
2290295RKRRDK
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00034PBMTransfer from AT4G00050Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015582839.11e-159PREDICTED: transcription factor UNE10
SwissprotQ8GZ381e-101UNE10_ARATH; Transcription factor UNE10
TrEMBLB9RD581e-157B9RD58_RICCO; DNA binding protein, putative
STRINGPOPTR_0002s14430.11e-139(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00050.16e-93bHLH family protein